| Acinetobacter * |
20/34
(59%) |
26/33
(79%) |
25/32
(79%) |
31/33
(94%) |
26/32
(82%) |
32/37
(87%) |
| A. johnsonii |
15/34 (45%) |
24/33 (73%) |
24/32 (75%) |
31/33 (94%) |
23/32 (72%) |
30/37 (81%) |
| B. pullorum |
32/34 (95%) |
19/33 (58%) |
29/32 (91%) |
21/33 (64%) |
17/32 (54%) |
17/37 (45%) |
|
Lactobacillus * |
28/34 (83%) |
22/33 (67%) |
26/32 (82%) |
19/33 (58%) |
18/32 (57%) |
19/37 (51%) |
| Alistipes * |
27/34 (80%) |
21/33 (64%) |
25/32 (79%) |
18/33 (55%) |
14/32 (44%) |
23/37 (62%) |
| E. coli |
15/34 (45%) |
21/33 (64%) |
21/32 (66%) |
30/33 (91%) |
19/32 (60%) |
21/37 (56%) |
| A. lwoffii |
11/34 (33%) |
20/33 (61%) |
21/32 (66%) |
26/33 (79%) |
21/32 (66%) |
27/37 (72%) |
| Lactobacillus gallinarum |
19/34 (56%) |
22/33 (67%) |
25/32 (79%) |
18/33 (55%) |
17/32 (54%) |
21/37 (56%) |
| A. gandensis |
11/34 (33%) |
18/33 (55%) |
17/32 (54%) |
29/33 (88%) |
14/32 (44%) |
22/37 (59%) |
|
Blautia * |
19/34 (56%) |
16/33 (49%) |
22/32 (69%) |
18/33 (55%) |
14/32 (44%) |
20/37 (54%) |
|
Faecalibacterium * |
19/34 (56%) |
18/33 (55%) |
21/32 (66%) |
17/33 (52%) |
15/32 (47%) |
19/37 (51%) |
|
Pseudoflavonifractor * |
18/34 (53%) |
16/33 (49%) |
20/32 (63%) |
18/33 (55%) |
14/32 (44%) |
21/37 (56%) |
| Lactobacillus johnsonii |
24/34 (71%) |
14/33 (43%) |
21/32 (66%) |
13/33 (40%) |
14/32 (44%) |
15/37 (40%) |
|
Lachnoclostridium * |
17/34 (50%) |
14/33 (43%) |
21/32 (66%) |
17/33 (52%) |
14/32 (44%) |
17/37 (45%) |
|
Flavonifractor * |
17/34 (50%) |
15/33 (46%) |
18/32 (57%) |
15/33 (46%) |
14/32 (44%) |
20/37 (54%) |
| Limosilactobacillus vaginalis |
19/34 (56%) |
16/33 (49%) |
19/32 (60%) |
13/33 (40%) |
14/32 (44%) |
17/37 (45%) |
| Streptococcus alactolyticus |
20/34 (59%) |
14/33 (43%) |
19/32 (60%) |
15/33 (46%) |
17/32 (54%) |
13/37 (35%) |
|
Anaeromassilibacillus * |
17/34 (50%) |
15/33 (46%) |
19/32 (60%) |
16/33 (49%) |
14/32 (44%) |
15/37 (40%) |
|
Corynebacterium * |
18/34 (53%) |
15/33 (46%) |
17/32 (54%) |
14/33 (43%) |
17/32 (54%) |
13/37 (35%) |
|
Eubacterium * |
15/34 (45%) |
16/33 (49%) |
17/32 (54%) |
15/33 (46%) |
14/32 (44%) |
16/37 (43%) |
| Limosilactobacillus reuteri |
20/34 (59%) |
15/33 (46%) |
18/32 (57%) |
12/33 (37%) |
14/32 (44%) |
14/37 (37%) |
| Merdimonas faecis |
15/34 (45%) |
13/33 (40%) |
18/32 (57%) |
16/33 (49%) |
14/32 (44%) |
16/37 (43%) |
|
Staphylococcus * |
15/34 (45%) |
15/33 (46%) |
16/32 (50%) |
16/33 (49%) |
17/32 (54%) |
13/37 (35%) |
| Bifidobacterium pseudolongum |
18/34 (53%) |
13/33 (40%) |
15/32 (47%) |
17/33 (52%) |
13/32 (41%) |
15/37 (40%) |
| Lactobacillus crispatus |
20/34 (59%) |
13/33 (40%) |
18/32 (57%) |
13/33 (40%) |
14/32 (44%) |
13/37 (35%) |
|
Drancourtella * |
15/34 (45%) |
14/33 (43%) |
16/32 (50%) |
14/33 (43%) |
14/32 (44%) |
15/37 (40%) |
| Ligilactobacillus salivarius |
16/34 (48%) |
15/33 (46%) |
14/32 (44%) |
12/33 (37%) |
14/32 (44%) |
13/37 (35%) |
| Rubneribacter badeniensis |
14/34 (42%) |
13/33 (40%) |
15/32 (47%) |
14/33 (43%) |
13/32 (41%) |
13/37 (35%) |
| Subdoligranulum variabile |
14/34 (42%) |
13/33 (40%) |
17/32 (54%) |
13/33 (40%) |
12/32 (38%) |
13/37 (35%) |
|
Gordonibacter * |
13/34 (39%) |
13/33 (40%) |
15/32 (47%) |
14/33 (43%) |
13/32 (41%) |
13/37 (35%) |
| Corynebacterium ammoniagenes |
13/34 (39%) |
12/33 (37%) |
14/32 (44%) |
14/33 (43%) |
13/32 (41%) |
13/37 (35%) |
|
Ruminococcus * |
11/34 (33%) |
13/33 (40%) |
15/32 (47%) |
13/33 (40%) |
14/32 (44%) |
13/37 (35%) |
| Lachnoclostridium phocaeense |
11/34 (33%) |
13/33 (40%) |
15/32 (47%) |
12/33 (37%) |
13/32 (41%) |
14/37 (37%) |
| Mammaliicoccus lentus |
14/34 (42%) |
11/33 (34%) |
13/32 (41%) |
13/33 (40%) |
15/32 (47%) |
12/37 (32%) |
|
Bacteroides * |
11/34 (33%) |
11/33 (34%) |
17/32 (54%) |
14/33 (43%) |
10/32 (32%) |
14/37 (37%) |
|
Brachybacterium * |
12/34 (36%) |
11/33 (34%) |
12/32 (38%) |
14/33 (43%) |
14/32 (44%) |
13/37 (35%) |
| Corynebacterium casei |
14/34 (42%) |
12/33 (37%) |
11/32 (35%) |
13/33 (40%) |
13/32 (41%) |
13/37 (35%) |
| Staphylococcus aureus |
13/34 (39%) |
11/33 (34%) |
14/32 (44%) |
12/33 (37%) |
14/32 (44%) |
12/37 (32%) |
| Fournierella massiliensis |
12/34 (36%) |
13/33 (40%) |
15/32 (47%) |
12/33 (37%) |
11/32 (35%) |
12/37 (32%) |
| Weissella thailandensis |
12/34 (36%) |
12/33 (37%) |
11/32 (35%) |
13/33 (40%) |
14/32 (44%) |
13/37 (35%) |
| Staphylococcus cohnii |
13/34 (39%) |
11/33 (34%) |
11/32 (35%) |
13/33 (40%) |
15/32 (47%) |
11/37 (29%) |
| Brevibacterium linens |
12/34 (36%) |
11/33 (34%) |
12/32 (38%) |
13/33 (40%) |
12/32 (38%) |
13/37 (35%) |
|
Clostridium * |
11/34 (33%) |
13/33 (40%) |
15/32 (47%) |
10/33 (31%) |
12/32 (38%) |
12/37 (32%) |
| Limosilactobacillus oris |
14/34 (42%) |
11/33 (34%) |
11/32 (35%) |
10/33 (31%) |
14/32 (44%) |
13/37 (35%) |
| Weissella jogaejeotgali |
12/34 (36%) |
12/33 (37%) |
11/32 (35%) |
12/33 (37%) |
13/32 (41%) |
13/37 (35%) |
| Corynebacterium urealyticum |
13/34 (39%) |
12/33 (37%) |
11/32 (35%) |
11/33 (34%) |
13/32 (41%) |
12/37 (32%) |
| Enterococcus hirae |
10/34 (30%) |
13/33 (40%) |
12/32 (38%) |
12/33 (37%) |
13/32 (41%) |
12/37 (32%) |
| Staphylococcus arlettae |
13/34 (39%) |
12/33 (37%) |
11/32 (35%) |
13/33 (40%) |
12/32 (38%) |
11/37 (29%) |
| Brachybacterium paraconglomeratum |
12/34 (36%) |
10/33 (31%) |
11/32 (35%) |
13/33 (40%) |
11/32 (35%) |
13/37 (35%) |
| Brachybacterium faecium |
12/34 (36%) |
10/33 (31%) |
11/32 (35%) |
12/33 (37%) |
11/32 (35%) |
12/37 (32%) |
| Angelakisella massiliensis |
10/34 (30%) |
10/33 (31%) |
12/32 (38%) |
10/33 (31%) |
10/32 (32%) |
13/37 (35%) |